Does Carnitine Cause Body Odor? Lume Deodorant Supplements & Body Odor ConsumerLab.com Comparison of short term and long term effects of peroral L carnitine intake: clinical implications of elevated TMAO levels in cardiovascular complications L carnitine supplements can cause a fishy odor in the breath, sweat, and urine. This is likely due to the formation of trimethylamine (TMA). TMA is also responsible for the pungent smell of What's the Difference Between CLA and Carnitine?